galaxy

Analysis tool

A platform for data-intensive scientific analysis and workflow management

Data intensive science for everyone.

GitHub

1k stars
70 watching
1k forks
Language: Python
last commit: almost 2 years ago
Linked from 1 awesome list

bioinformaticsdnagenomicshacktoberfestngspipelinesciencesequencingusegalaxyworkflowworkflow-engine

Backlinks from these awesome lists:

Related projects:

RepositoryDescriptionStars
samapriya/planet-gee-pipeline-cliA command-line tool for automating data processing and uploads from Planet's API to Google Earth Engine.42
bjpop/rubraA bioinformatics pipeline system that supports running workflow stages on a distributed compute cluster.38
natcap/taskgraphA Python library for managing and optimizing computational workflows with parallel processing and data reuse.22
kevin-hanselman/dudA lightweight tool for managing and versioning large data alongside source code in data pipelines184
databiosphere/toilA workflow management system designed to efficiently run pipelines in various environments.901
prodmodel/prodmodelA tool for managing data science pipelines by automating build, testing, and deployment processes while ensuring correctness and performance.58
linkedin/brooklinA distributed system for streaming data between heterogeneous systems with high reliability and throughput at scale931
scipipe/scipipeA flexible and efficient way to write and run complex workflows using Go programming language1,081
giacbrd/smartpipelineA framework for designing and executing concurrent data pipelines with a focus on simplicity and efficiency25
montilab/pipelinerA framework for defining and automating bioinformatics pipelines using Nextflow.44
lightforever/mlcompA distributed framework for building and managing complex machine learning pipelines with a user-friendly interface.188
pipefunc/pipefuncAutomates and simplifies the creation of function pipelines for efficient execution of scientific workflows.230
whitaker-io/machineA library for creating data workflows that can be simple or complex, with features like recursion and memoization.159
formlio/formlA framework for managing the lifecycle of data science projects from research to production105
huggingface/datatroveA platform-agnostic data processing framework for large-scale text data pipelines2,103