awesome-rseng
Research orgs
A curated list of GitHub organizations focused on research and academic software projects
A curated list of GitHub organizations that primarily serve open source or academic software projects.
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last commit: over 2 years ago awesome-listawesome-rsenghacktoberfestresearch-software-engineeringrseng
Astrophysics | |||
| LSST | the legacy survey of space and time | ||
| LSST Camera Data Handling | |||
Environment | |||
| The National Capital Project | : technology for people and nature, see | ||
Genomics | |||
| The ENCODE Data Consortium | or "Encode DCC" serving the Encode Data Portal | ||
Geoscience | |||
| Pangeo | : A community effort for big data geoscience | ||
Health and Medicine / Epidemiology | |||
| MRC Centre for Outbreak Analysis and Modelling | : open source software for the | ||
| VIMC | : open source code to support the | ||
| Reside IC | : Research Software for the Infectious Disease Epidemiology @ Imperial College | ||
High Performance Computing | |||
| CEED | : ECP Co-Design Center for Efficient Exascale Discretizations (CEED) | ||
| spack | a flexible package manager for multiple versions, configurations, and compilers | ||
| RADIUSS | : Rapid Application Development via an Institutional Universal Software Stack | ||
Institutions / Academic Groups | |||
| Imperial College London | |||
Institutions / Academic Labs | |||
| Nolan Lab | at Stanford University focuses on signaling in the immune system and study of oncogenic process | ||
| Poldrack Lab | at Stanford University focuses on standard workflows for processing structural and functional neuroimaging (MRI) data | ||
Institutions / National Labs | |||
| SLAC | National Accelerator Laboratory | ||
| LINAC Coherent Light Source | at SLAC for experiments with High Energy Physics, Materials Science, Biologists, etc | ||
| ORNL | Oak Ridge National Laboratory | ||
| OLCF | Oak Ridge Leadership Computing Facility | ||
| BNL | Brookhaven National Laboratory | ||
| BNL-SDCC | Brookhaven National Laboratory Scientific Data and Computing Center | ||
| NSLS-II | National Synchrotron Light Source II at Brookhaven National Laboratory | ||
| BNL-NPP | Brookhaven National Laboratory Nuclear and Particle Physics Software Group | ||
| LLNL | Lawrence Livermore National Laboratory (and its ) | ||
Materials Science / Neutron Scattering | |||
| Mantid Project | Framework for analysis and visualization of neutron scattering and muon spectroscopy data | ||
| neutrons | Neutron Scattering Softwares, mainly for | ||
Neuroscience | |||
| nipreps | standard workflows for processing a wide variety of neuroimaging (MRI) data | ||
| nipy | utilities for working with neuroimaging (MRI) data | ||
Probabilistic Programming | |||
| The Turing Language | Bayesian inference with probabilistic programming using the Julia language | ||
Psychology | |||
| The Experiment Factory | tools, containers, and web based experiments | ||
Containers | |||
| singularityhub | open source tools to support Singularity containers | ||
Workflows | |||
| Snakemake | scientific workflow manager written in Python | ||
Training | |||
| CarpenPi | Running Carpentries Training on Raspberry Pis | ||