SpaGCN

Tissue segmentation tool

An algorithmic framework to integrate gene expression data with spatial location and histological information to identify distinct regions in tissue samples.

SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network

GitHub

198 stars
2 watching
60 forks
Language: Python
last commit: about 1 year ago
graph-convolutional-networkspatial-domainsspatial-transcriptomicsspatially-variable-genes

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