encode

Connectome encoder

Encodes brain connectomes into multidimensional arrays to support neuroanatomy operations and statistical inference

Method for encoding brain connectomes in multidimensional arrays (tensors).

GitHub

38 stars
13 watching
25 forks
Language: MATLAB
last commit: almost 4 years ago
Linked from 1 awesome list

brainbrain-connectomesdiffusion-mriencoding-connectomeslifematlabmbamultidimensional-arraystractographywhite-matter-connectomes

Backlinks from these awesome lists:

Related projects:

Repository Description Stars
neurojson/jsonlab A compact, portable, and robust JSON/binary-JSON encoder/decoder for MATLAB and Octave. 303
zudi-lin/pytorch_connectomics A deep learning framework for automatic and semi-automatic segmentation of 3D image stacks in connectomics 172
brainlife/bct A MATLAB toolbox for analyzing complex brain network data 19
natverse/nat An R package for visualizing and analyzing 3D biological image data 64
cwatson/braingraph Analyzes brain MRI data to reveal complex connections between brain regions 183
franck-dernoncourt/neuroner Named-entity recognition using neural networks. 1,701
hagaygarty/mdcnn A MATLAB toolbox implementing 3D Convolutional Neural Networks for volumetric inputs with various features and pre-configured examples. 53
olekscode/mlneuralnetwork A Smalltalk implementation of a multi-layer neural network 7
guillaumegenthial/sequence_tagging Named Entity Recognition model using LSTM and CRF with character embeddings 1,947
ake-persson/encoding Provides a generic interface to encode and decode data in a platform-agnostic way. 9
cwxcode/lstm-matlab A Matlab implementation of a Long Short-Term Memory neural network architecture 51
fxamacker/cbor A library for encoding and decoding binary data in a compact and secure format. 750
mickcrosse/mtrf-toolbox A MATLAB package for modeling and analyzing multivariate neural responses to dynamic stimuli. 85
benedekrozemberczki/m-nmf An implementation of Community Preserving Network Embedding using deep learning and matrix factorization techniques 121
canlab/canlabcore A collection of core tools and functionalities for neuroimaging analysis in MATLAB. 149