BioTDA
TDA toolbox
A collection of resources and tools for applying Topological Data Analysis to bioinformatics and artificial intelligence problems
List of Resources for Topological Data Analysis in Bioinformatics and Artificial Intelligence
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bioinformaticstopological-data-analysis
fatemehtarashi/awesome-tdaRelated projects:
| Repository | Description | Stars |
|---|---|---|
 jdidion/biotools | A collection of bioinformatics tools and resources organized by topic and category | 585 |
 wildart/tda.jl | A Julia package for analyzing high-dimensional data by applying topological methods to understand complex relationships and patterns | 38 |
 mbb-team/vba-toolbox | A toolbox providing statistical analysis, model simulation, and visualization tools for neurobiological and behavioral data analysis. | 130 |
 bioruby/bioruby | A Ruby library for developing bioinformatics software by parsing and analyzing biological data from various sources. | 378 |
 lancelafontaine/bioinformatics-compbio-tools | A curated list of useful bioinformatics and computational biology tools, sorted by category. | 49 |
 kshedden/tda | Provides methods and algorithms for analyzing topological data from images in a programming language | 7 |
 atlasoflivingaustralia/ala4r | Provides R interface to access and manipulate Australian biodiversity data | 42 |
 tdaverse/ggtda | A ggplot2 extension for visualizing persistent homology and topological data analysis | 21 |
 bayesnet/bnt | Provides a set of tools and algorithms for Bayesian networks in MATLAB | 468 |
 bebop/poly | A comprehensive Go package for computational synthetic biology and gene engineering | 676 |
 taosdata/tdengine | An optimized time-series database designed for high-volume IoT data ingestion and analysis. | 23,395 |
 bodenmillergroup/histocat | An interactive analysis toolbox for multiplexed image cytometry data | 1 |
 zhangxiaoyu11/omivae | An end-to-end deep learning model that extracts low-dimensional latent space and performs multi-class classification on multi-omics datasets. | 31 |
 shawshank-smile/pytsda-tdengine | An end-to-end time series data analysis system with integrated machine learning and deep learning capabilities | 23 |
 technosophos/vala-tmbundle | Provides syntax highlighting and code completion support for the Vala programming language | 21 |